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244 lines
7.3 KiB
244 lines
7.3 KiB
<!DOCTYPE html>
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<html lang="en">
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<head>
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<meta charset="utf-8">
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<meta http-equiv="X-UA-Compatible" content="IE=edge">
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<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
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<title>Clinical trials viewer</title>
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<!-- Bootstrap -->
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<link href="<?php echo SITE_URL; ?>css/bootstrap.min.css" rel="stylesheet">
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<!-- CTNotebook CSS -->
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<link href="<?php echo SITE_URL; ?>ctviewer.css" rel="stylesheet">
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<meta name="author" content="Benjamin Gregory Carlisle PhD Email: murph@bgcarlisle.com Website: https://www.bgcarlisle.com/ Social media: https://scholar.social/@bgcarlisle">
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</head>
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<body>
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<div class="container-fluid ctviewer-nav" id="nav-container" style="position: fixed; top: 0; z-index: 1000;">
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<ul class="nav">
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<li class="nav-item">
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<a class="nav-link active" href="<?php echo SITE_URL; ?>">Clinical trials viewer</a>
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</li>
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<li class="nav-item">
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<a class="nav-link" href="https://blog.bgcarlisle.com/ctviewer/" target="_blank">About</a>
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</li>
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<li class="nav-item">
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<a class="nav-link" href="#" onclick="show_citation(event);">Cite</a>
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</li>
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<li class="nav-item">
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<a class="nav-link" href="https://codeberg.org/bgcarlisle/ClinicalTrialsViewer" target="_blank">Source</a>
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</li>
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</ul>
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</div>
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<div id="citeMask" class="ctvHidden" onclick="hide_citation (event);"> </div>
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<div id="citeCTViewer" class="ctvHidden">
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<h2>How to cite Clinical trials viewer</h2>
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<h3>BibTeX</h3>
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<pre>
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@software{carlisle_ctviewer_2019,
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location = {{Retrieved from https://trials.bgcarlisle.com/}},
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title = {Clinical trials viewer},
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url = {https://trials.bgcarlisle.com/},
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organization = {{The Grey Literature}},
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date = {2019-06},
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author = {Carlisle, Benjamin Gregory}
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}
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</pre>
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<h3>Vancouver</h3>
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<p>Carlisle BG. Clinical trials viewer [Internet]. Retrieved from https://trials.bgcarlisle.com/: The Grey Literature; 2019. Available from: https://trials.bgcarlisle.com/</p>
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<h3>AMA</h3>
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<p>Carlisle BG. <i>Clinical Trials Viewer</i>. Retrieved from https://trials.bgcarlisle.com/: The Grey Literature; 2019. https://trials.bgcarlisle.com/.</p>
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<h3>MLA</h3>
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<p>Carlisle, Benjamin Gregory. <i>Clinical Trials Viewer.</i> The Grey Literature, 2019, https://trials.bgcarlisle.com/.</p>
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<h3>RRID</h3>
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<p>You may also cite this resource as: (Clinical trials viewer, RRID:SCR_019230).</p>
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<button onclick="hide_citation(event);" class="btn btn-block btn-primary">Close citation information</button>
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</div>
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<?php
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if ( ! isset ( $_GET['address'] ) ) { // No ctviewer address specified
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// Show search box
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include ( ABS_PATH . 'search-field.php' );
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} else {
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// Show plot
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include ( ABS_PATH . "plot-viewer.php" );
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}
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?>
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<!-- jQuery -->
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<script src="<?php echo SITE_URL; ?>jquery-3.4.1.min.js"></script>
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<!-- Popper.js -->
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<script src="<?php echo SITE_URL; ?>js/bootstrap.bundle.min.js"></script>
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<!-- Bootstrap JS -->
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<script src="<?php echo SITE_URL; ?>js/bootstrap.min.js"></script>
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<!-- CTViewer JS -->
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<script>
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var ctviewerurl = '<?php echo SITE_URL; ?>';
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function ctviewer_search () {
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$('#search-form').slideUp(500, function () {
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$('#search-progress').html('<div style="text-align: center; margin-top: 50px;"><img src="https://trials.bgcarlisle.com/images/loading.gif"><p>Downloading data from <a href="https://www.clinicaltrials.gov/">www.clinicaltrials.gov</a>. This may take a minute or two.</p></div>');
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$('#search-progress').slideDown();
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});
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$.ajax ({
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url: ctviewerurl + 'query.php',
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type: 'post',
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data: {
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drug: $('#drug-query').val(),
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indication: $('#indication-query').val(),
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paeds: $('#paeds-checkbox').prop('checked')
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},
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dataType: 'html'
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}).done ( function (response) {
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$('#search-progress').html('');
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if ( response != 'FALSE' ) {
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window.location.href = ctviewerurl + response + '/';
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} else {
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alert ('Could not download trial data for: ' + $('#drug-query').val());
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window.location.href = ctviewerurl;
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}
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});
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}
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function show_trial_details ( nct_number ) {
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$('.ctvTrial').removeClass('selectedTrial');
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$('.ctvTrialDetails:not(#ctvDetails-' + nct_number + ')').slideUp(400, function () {
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// This fails in the case that there are no other Trial Details div's
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$('#ctvDetails-' + nct_number).slideDown();
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$('#ctvTrial-' + nct_number).addClass('selectedTrial');
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});
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// So I put this here for the case where there's only one:
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if ($('.ctvTrialDetails').length == 1) {
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$('#ctvDetails-' + nct_number).slideDown();
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$('#ctvTrial-' + nct_number).addClass('selectedTrial');
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}
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}
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function hide_trial_details () {
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$('.ctvTrial').removeClass('selectedTrial');
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$('.ctvTrialDetails').slideUp();
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}
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function show_citation (event) {
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event.preventDefault();
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$('#citeMask').fadeIn(400, function () {
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$('#citeCTViewer').slideDown();
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});
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}
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function hide_citation (event) {
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event.preventDefault();
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$('#citeCTViewer').slideUp(400, function () {
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$('#citeMask').fadeOut();
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});
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}
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function ctv_sort_trials (event, button, sortby) {
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event.preventDefault();
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$.ajax ({
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url: ctviewerurl + 'sort.php',
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type: 'post',
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data: {
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sortby: sortby,
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address: '<?php echo $ctviewer['address']; ?>'
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},
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dataType: 'html'
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}).done ( function (response) {
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var $trials = $('.ctvTrial');
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var sorted_trials = $trials.sort(function (a, b) {
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return $(a).attr(sortby) > $(b).attr(sortby) ? 1 : -1;
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});
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$('.ctvTrial').remove();
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$('div#ctvDrugViewGrid').append(sorted_trials);
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$('#sortby button').removeAttr('disabled');
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button.prop('disabled', true);
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});
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}
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$('#drug-query, #indication-query').bind('keypress', function(e) {
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if (e.keyCode == 13) {
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ctviewer_search();
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}
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});
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$(window).scroll( function () {
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$('#ctvYearMarkerContainer').css('top', $(this).scrollTop() + 50);
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});
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$(document).bind('keydown', function(keyStrokeEvent) {
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if (keyStrokeEvent.keyCode == 74) { // 'j' is pressed
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if ($('.selectedTrial').length) { // there is a selected trial
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$('.selectedTrial').last().next().click();
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} else { // no selected trial
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$('.ctvTrial').first().click();
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}
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}
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if (keyStrokeEvent.keyCode == 75) { // 'k' is pressed
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$('.selectedTrial').first().prev().click();
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}
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if (keyStrokeEvent.keyCode == 67) { // 'c' is pressed
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hide_trial_details();
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}
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});
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$(document).ready(function () {
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// Fix the navigation bar
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if ( $('#ctvDrugViewGrid').length ) {
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if ( $("#nav-container").width() < $('#ctvDrugViewGrid').width() ) {
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$("#nav-container").width(<?php echo $viewerwidth + 350; ?>);
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}
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}
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// Sort FDA info
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var $fdainfo = $('.fdaDocument, .fdaSubmission, .fdaPMC');
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var sorted_fda_info = $fdainfo.sort(function (a, b) {
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return $(a).attr('fdaSortDate') > $(b).attr('fdaSortDate') ? 1 : -1;
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});
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$('.fdaDocument, .fdaSubmission').remove();
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$('#fdaInfoContainer').append(sorted_fda_info);
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// Sort trials, if necessary
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if ( '<?php echo $ctviewer['sort_by']; ?>' != 'ctvSortStartDate' ) {
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$('#' + '<?php echo $ctviewer['sort_by']; ?>' + 'Button').click();
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}
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});
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</script>
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</body>
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</html>
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